scholarly journals Delineation of the breakpoint at 18q21.1 in a cell line (KARPAS1106) derived from mediastinal B-cell lymphoma by fluorescencein situ hybridization with multiple YAC clones

Author(s):  
Akiko Tamura ◽  
Tomoaki Akagi ◽  
Naozo Nakazawa ◽  
Kei Kashima ◽  
Shigeo Nakamura ◽  
...  
2007 ◽  
Vol 48 (5) ◽  
pp. 1038-1041 ◽  
Author(s):  
Mattias Berglund ◽  
Ulf Thunberg ◽  
Marie Fridberg ◽  
Anette Gjörloff Wingren ◽  
Joachim Gullbo ◽  
...  

Blood ◽  
2004 ◽  
Vol 104 (11) ◽  
pp. 4266-4266
Author(s):  
Stefan Nagel ◽  
Maren Kaufmann ◽  
Hans G. Drexler ◽  
Roderick A.F. MacLeod

Abstract Homeobox (Hox) genes mediate tissue-specific expression during development where dysregulation may provoke neoplasia and the involvement of specific Hox genes in hematopoietic malignancies is a recurring theme. In B-cell neoplasias dysregulation may be effected by juxtaposition of Hox genes with immunoglobulin gene regulatory elements, notably IGH. We describe the molecular cytogenetic analysis of a cell line (Epstein-Barr virus negative) established from ascites fluid taken from a 67-year-old male patient at diagnosis of B-cell non-Hodgkin’s lymphoma (follicular, small cleaved cell type). The cell line carries a complex t(8;14;18)(q24;q32;q21) leading to activation of both MYC (at 8q24) and BCL2 (at 18q21) via juxtaposition with different enhancer regions of the IGH locus at 14q32. Both translocated alleles of MYC and BCL2 showed additional genomic amplification in conjunction with IGH by formation of an homogeneously staining region on the der(8). Interestingly, the IGH allele on the second chromosome 14 homolog had also undergone chromosomal juxtaposition, this time with a breakpoint at the HOXB cluster at 17q21 leading to transcriptional activation of HOXB7 but of no other HOXB gene. Although its deregulated expression has been described in certain solid tumor subtypes, notably malignant melanoma, this is the first report describing the involvement of HOXB7 in hematopoietic malignancy. Moreover, the cell line carries a novel internal duplication of chromosome 3, dup(3)(q21q27), effecting fusion of BCL6 with MBNL1, a triplet-expansion repeat gene preferentially expressed during hematopoiesis. Our data thus identify a cell line resource modelling novel hematopoietic rearrangements, notably HOXB7 - an attractive candidate target of recurrent 17q2 rearrangements in B-cell lymphoma.


2012 ◽  
Vol 5 (1) ◽  
pp. 648 ◽  
Author(s):  
Sean D Hooper ◽  
Xiang Jiao ◽  
Elisabeth Sundström ◽  
Farah L Rehman ◽  
Christian Tellgren-Roth ◽  
...  

Gene ◽  
2000 ◽  
Vol 251 (1) ◽  
pp. 37-43 ◽  
Author(s):  
Koichi Ichimura ◽  
Hiroko Hanafusa ◽  
Hidetaka Takimoto ◽  
Yoichiro Ohgama ◽  
Tadaatsu Akagi ◽  
...  

1997 ◽  
Vol 12 (3) ◽  
pp. 177-186 ◽  
Author(s):  
Aicha Demidem ◽  
Tammy Lam ◽  
Steve Alas ◽  
Kandasamy Hariharan ◽  
Nabil Hanna ◽  
...  

2003 ◽  
Vol 77 (3) ◽  
pp. 2134-2146 ◽  
Author(s):  
Vicky M.-H. Sung ◽  
Shigetaka Shimodaira ◽  
Alison L. Doughty ◽  
Gaston R. Picchio ◽  
Huong Can ◽  
...  

ABSTRACT Hepatitis C virus (HCV) is a major cause of chronic hepatitis, liver cirrhosis, and hepatocellular carcinoma. Studies of HCV replication and pathogenesis have so far been hampered by the lack of an efficient tissue culture system for propagating HCV in vitro. Although HCV is primarily a hepatotropic virus, an increasing body of evidence suggests that HCV also replicates in extrahepatic tissues in natural infection. In this study, we established a B-cell line (SB) from an HCV-infected non-Hodgkin's B-cell lymphoma. HCV RNA and proteins were detectable by RNase protection assay and immunoblotting. The cell line continuously produces infectious HCV virions in culture. The virus particles produced from the culture had a buoyant density of 1.13 to 1.15 g/ml in sucrose and could infect primary human hepatocytes, peripheral blood mononuclear cells (PBMCs), and an established B-cell line (Raji cells) in vitro. The virus from SB cells belongs to genotype 2b. Single-stranded conformational polymorphism and sequence analysis of the viral RNA quasispecies indicated that the virus present in SB cells most likely originated from the patient's spleen and had an HCV RNA quasispecies pattern distinct from that in the serum. The virus production from the infected primary hepatocytes showed cyclic variations. In addition, we have succeeded in establishing several Epstein-Barr virus-immortalized B-cell lines from PBMCs of HCV-positive patients. Two of these cell lines are positive for HCV RNA as detected by reverse transcriptase PCR and for the nonstructural protein NS3 by immunofluorescence staining. These observations unequivocally establish that HCV infects B cells in vivo and in vitro. HCV-infected cell lines show significantly enhanced apoptosis. These B-cell lines provide a reproducible cell culture system for studying the complete replication cycle and biology of HCV infections.


2020 ◽  
Vol 390 (2) ◽  
pp. 111986
Author(s):  
Michael C. Rahe ◽  
Cheryl M.T. Dvorak ◽  
Barry Wiseman ◽  
Daniel Martin ◽  
Michael P. Murtaugh

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